blocking.hpp File Reference

Utilities for handling blocks of cells. More...

#include "macros.hpp"
#include <vector>
#include <algorithm>
#include <stdexcept>

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Classes
struct	scran::VariableBlockWeightParameters
	Parameters for variable_block_weight(). More...

Namespaces
namespace	scran
	Functions for single-cell RNA-seq analyses.

Enumerations
enum class	scran::WeightPolicy : char { NONE , VARIABLE , EQUAL }

Functions
template<typename Id_ >
size_t	scran::count_ids (size_t length, const Id_ *ids)
template<typename Output_ = int, bool allow_zeros_ = false, typename Id_ >
std::vector< Output_ >	scran::tabulate_ids (size_t length, const Id_ *ids, bool allow_zeros=false)
double	scran::variable_block_weight (double s, const VariableBlockWeightParameters &params)
template<typename Size_ >
std::vector< double >	scran::compute_block_weights (const std::vector< Size_ > &sizes, WeightPolicy policy, const VariableBlockWeightParameters &param)

Detailed Description

Utilities for handling blocks of cells.