This is the complete list of members for scran::ScoreMarkers, including all inherited members.

ComputeSummaries typedef	scran::ScoreMarkers
run(const tatami::Matrix< Value_, Index_ > p, const Group_ group, std::vector< Stat_ * > means, std::vector< Stat_ * > detected, std::vector< std::vector< Stat_ * > > cohen, std::vector< std::vector< Stat_ * > > auc, std::vector< std::vector< Stat_ * > > lfc, std::vector< std::vector< Stat_ * > > delta_detected) const	scran::ScoreMarkers	inline
run(const tatami::Matrix< Value_, Index_ > p, const Group_ group) const	scran::ScoreMarkers	inline
run_blocked(const tatami::Matrix< Value_, Index_ > p, const Group_ group, const Block_ block, std::vector< Stat_ > means, std::vector< Stat_ * > detected, std::vector< std::vector< Stat_ * > > cohen, std::vector< std::vector< Stat_ * > > auc, std::vector< std::vector< Stat_ * > > lfc, std::vector< std::vector< Stat_ * > > delta_detected) const	scran::ScoreMarkers	inline
run_blocked(const tatami::Matrix< Value_, Index_ > p, const Group_ group, const Block_ *block) const	scran::ScoreMarkers	inline
set_block_weight_policy(WeightPolicy w=Defaults::block_weight_policy)	scran::ScoreMarkers	inline
set_cache_size(int c=Defaults::cache_size)	scran::ScoreMarkers	inline
set_compute_auc(ComputeSummaries s=Defaults::compute_all_summaries())	scran::ScoreMarkers	inline
set_compute_auc(bool c)	scran::ScoreMarkers	inline
set_compute_auc(differential_analysis::summary s, bool c)	scran::ScoreMarkers	inline
set_compute_cohen(ComputeSummaries s=Defaults::compute_all_summaries())	scran::ScoreMarkers	inline
set_compute_cohen(bool c)	scran::ScoreMarkers	inline
set_compute_cohen(differential_analysis::summary s, bool c)	scran::ScoreMarkers	inline
set_compute_delta_detected(ComputeSummaries s=Defaults::compute_all_summaries())	scran::ScoreMarkers	inline
set_compute_delta_detected(bool c)	scran::ScoreMarkers	inline
set_compute_delta_detected(differential_analysis::summary s, bool c)	scran::ScoreMarkers	inline
set_compute_lfc(ComputeSummaries s=Defaults::compute_all_summaries())	scran::ScoreMarkers	inline
set_compute_lfc(bool c)	scran::ScoreMarkers	inline
set_compute_lfc(differential_analysis::summary s, bool c)	scran::ScoreMarkers	inline
set_num_threads(int n=Defaults::num_threads)	scran::ScoreMarkers	inline
set_summary_max(bool s)	scran::ScoreMarkers	inline
set_summary_mean(bool s)	scran::ScoreMarkers	inline
set_summary_median(bool s)	scran::ScoreMarkers	inline
set_summary_min(bool s)	scran::ScoreMarkers	inline
set_summary_min_rank(bool s)	scran::ScoreMarkers	inline
set_threshold(double t=Defaults::threshold)	scran::ScoreMarkers	inline
set_variable_block_weight_parameters(VariableBlockWeightParameters v=Defaults::variable_block_weight_parameters)	scran::ScoreMarkers	inline