scran
C++ library for basic single-cell RNA-seq analyses
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MedianSizeFactors.hpp File Reference

Compute median-based size factors. More...

#include "../utils/macros.hpp"
#include <vector>
#include <limits>
#include "tatami/tatami.hpp"
#include "CenterSizeFactors.hpp"
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Classes

class  scran::MedianSizeFactors
 Compute median-based size factors to handle composition bias. More...
 
struct  scran::MedianSizeFactors::Defaults
 Default parameter settings. More...
 
struct  scran::MedianSizeFactors::Results< Out >
 Result of the size factor calculation. More...
 

Namespaces

namespace  scran
 Functions for single-cell RNA-seq analyses.
 

Detailed Description

Compute median-based size factors.