scran
C++ library for basic single-cell RNA-seq analyses
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normalization Directory Reference
Directory dependency graph for normalization:
scran/normalization

Files

 CenterSizeFactors.hpp
 Center size factors prior to normalization.
 
 ChoosePseudoCount.hpp
 Choose a suitable pseudo-count.
 
 GroupedSizeFactors.hpp
 Compute size factors for groups of cells.
 
 LogNormCounts.hpp
 Compute log-normalized expression values.
 
 MedianSizeFactors.hpp
 Compute median-based size factors.
 
 quick_grouped_size_factors.hpp
 Quickly compute grouped size factors.
 
 SanitizeSizeFactors.hpp