Compute PCA after adjusting for differences between batch sizes. More...
#include "tatami/tatami.hpp"#include "irlba/irlba.hpp"#include "Eigen/Dense"#include <vector>#include <cmath>#include "utils.hpp"#include "convert.hpp"#include "wrappers.hpp"#include "blocking.hpp"
Include dependency graph for MultiBatchPca.hpp:
This graph shows which files directly or indirectly include this file:
Go to the source code of this file.
Classes | |
| class | scran::MultiBatchPca |
| Compute PCA after adjusting for differences between batch sizes. More... | |
| struct | scran::MultiBatchPca::Defaults |
| Default parameter settings. More... | |
| struct | scran::MultiBatchPca::Results |
| Container for the PCA results. More... | |
Namespaces | |
| namespace | scran |
| Functions for single-cell RNA-seq analyses. | |
Detailed Description
Compute PCA after adjusting for differences between batch sizes.
