Compute typical per-cell quality control metrics from an RNA count matrix. More...
#include "../utils/macros.hpp"#include <vector>#include <limits>#include "tatami/base/Matrix.hpp"#include "PerCellQcMetrics.hpp"#include "utils.hpp"
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Classes | |
| class | scran::PerCellRnaQcMetrics |
| Compute typical per-cell quality control metrics from an RNA count matrix. More... | |
| struct | scran::PerCellRnaQcMetrics::Defaults |
| Default parameters. More... | |
| struct | scran::PerCellRnaQcMetrics::Buffers< Float, Integer > |
| Buffers for direct storage of the calculated statistics. More... | |
| struct | scran::PerCellRnaQcMetrics::Results |
| Result store for QC metric calculations. More... | |
Namespaces | |
| namespace | scran |
| Functions for single-cell RNA-seq analyses. | |
Detailed Description
Compute typical per-cell quality control metrics from an RNA count matrix.
