quality_control Directory Reference

Directory dependency graph for quality_control:

Files
	ChooseOutlierFilters.hpp
	Define outlier filters using a MAD-based approach.
	ComputeMedianMad.hpp
	Compute the median and MAD from an array of values.
	FilterCells.hpp
	Filter out low-quality cells from the count matrix.
	PerCellAdtQcMetrics.hpp
	Compute per-cell quality control metrics from an ADT count matrix.
	PerCellCrisprQcMetrics.hpp
	Compute per-cell quality control metrics from a CRISPR guide count matrix.
	PerCellQcMetrics.hpp
	Compute a variety of per-cell quality control metrics from a count matrix.
	PerCellRnaQcMetrics.hpp
	Compute typical per-cell quality control metrics from an RNA count matrix.
	SuggestAdtQcFilters.hpp
	Create filters to identify low-quality cells from ADT-derived QC metrics.
	SuggestCrisprQcFilters.hpp
	Create filters to identify low-quality cells from CRISPR-derived QC metrics.
	SuggestRnaQcFilters.hpp
	Create filters to identify low-quality cells from RNA-derived QC metrics.