SuggestRnaQcFilters.hpp File Reference

Create filters to identify low-quality cells from RNA-derived QC metrics. More...

#include "../utils/macros.hpp"
#include <vector>
#include <cstdint>
#include "PerCellRnaQcMetrics.hpp"
#include "ComputeMedianMad.hpp"
#include "ChooseOutlierFilters.hpp"

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Classes
class	scran::SuggestRnaQcFilters
	Create filters to identify low-quality cells from RNA-derived QC metrics. More...
struct	scran::SuggestRnaQcFilters::Defaults
	Default parameters. More...
struct	scran::SuggestRnaQcFilters::Thresholds
	Thresholds to define outliers on each metric. More...

Namespaces
namespace	scran
	Functions for single-cell RNA-seq analyses.

Detailed Description

Create filters to identify low-quality cells from RNA-derived QC metrics.