scran::FitVarianceTrend::Defaults Struct Reference

Parameter defaults for trend fitting. More...

#include <FitVarianceTrend.hpp>

Static Public Attributes
static constexpr double	minimum_mean = 0.1
static constexpr bool	filter = true
static constexpr bool	transform = true
static constexpr double	span = 0.3
static constexpr bool	use_fixed_width = false
static constexpr double	fixed_width = 1
static constexpr int	minimum_window_count = 200

Detailed Description

Parameter defaults for trend fitting.

Member Data Documentation

minimum_mean

constexpr double scran::FitVarianceTrend::Defaults::minimum_mean = 0.1

staticconstexpr

See set_minimum_mean() for details.

filter

constexpr bool scran::FitVarianceTrend::Defaults::filter = true

staticconstexpr

See set_filter() for details.

transform

constexpr bool scran::FitVarianceTrend::Defaults::transform = true

staticconstexpr

See set_transform() for details.

span

constexpr double scran::FitVarianceTrend::Defaults::span = 0.3

staticconstexpr

See set_span() for details.

use_fixed_width

constexpr bool scran::FitVarianceTrend::Defaults::use_fixed_width = false

staticconstexpr

See set_use_fixed_width() for details.

fixed_width

constexpr double scran::FitVarianceTrend::Defaults::fixed_width = 1

staticconstexpr

See set_fixed_width() for details.

minimum_window_count

constexpr int scran::FitVarianceTrend::Defaults::minimum_window_count = 200

staticconstexpr

See set_minimum_window_count() for details.

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The documentation for this struct was generated from the following file:

• scran/feature_selection/FitVarianceTrend.hpp