scran::ScoreMarkers::Defaults Struct Reference

Default parameter settings. More...

#include <ScoreMarkers.hpp>

Collaboration diagram for scran::ScoreMarkers::Defaults:

Static Public Member Functions
static constexpr ComputeSummaries	compute_all_summaries ()
static constexpr ComputeSummaries	compute_no_summaries ()

Static Public Attributes
static constexpr double	threshold = 0
static constexpr int	num_threads = 1
static constexpr int	cache_size = 100
static constexpr WeightPolicy	block_weight_policy = WeightPolicy::VARIABLE
static constexpr VariableBlockWeightParameters	variable_block_weight_parameters = VariableBlockWeightParameters()

Detailed Description

Default parameter settings.

Member Function Documentation

compute_all_summaries()

static constexpr ComputeSummaries scran::ScoreMarkers::Defaults::compute_all_summaries ( )

inlinestaticconstexpr

Specify that all summary statistics should be computed for a particular effect size.

compute_no_summaries()

static constexpr ComputeSummaries scran::ScoreMarkers::Defaults::compute_no_summaries ( )

inlinestaticconstexpr

Specify that no summary statistics should be computed for a particular effect size.

Member Data Documentation

threshold

constexpr double scran::ScoreMarkers::Defaults::threshold = 0

staticconstexpr

See set_threshold() for details.

num_threads

constexpr int scran::ScoreMarkers::Defaults::num_threads = 1

staticconstexpr

See set_num_threads() for details.

cache_size

constexpr int scran::ScoreMarkers::Defaults::cache_size = 100

staticconstexpr

See set_cache_size() for details.

block_weight_policy

constexpr WeightPolicy scran::ScoreMarkers::Defaults::block_weight_policy = WeightPolicy::VARIABLE

staticconstexpr

See set_block_weight_policy() for more details.

variable_block_weight_parameters

constexpr VariableBlockWeightParameters scran::ScoreMarkers::Defaults::variable_block_weight_parameters = VariableBlockWeightParameters()

staticconstexpr

See set_variable_block_weight_parameters() for more details.

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The documentation for this struct was generated from the following file:

• scran/differential_analysis/ScoreMarkers.hpp