ScoreMarkers.hpp File Reference

Compute marker scores for each gene in each group of cells. More...

#include "../utils/macros.hpp"
#include "MatrixCalculator.hpp"
#include "cohens_d.hpp"
#include "simple_diff.hpp"
#include "summarize_comparisons.hpp"
#include "../utils/vector_to_pointers.hpp"
#include "../utils/average_vectors.hpp"
#include "../utils/blocking.hpp"
#include "tatami/tatami.hpp"
#include <array>
#include <map>
#include <vector>

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Classes
class	scran::ScoreMarkers
	Score each gene as a candidate marker for each group of cells. More...
struct	scran::ScoreMarkers::Defaults
	Default parameter settings. More...
struct	scran::ScoreMarkers::Results< Stat_ >
	Results of the marker scoring. More...

Namespaces
namespace	scran
	Functions for single-cell RNA-seq analyses.

Detailed Description

Compute marker scores for each gene in each group of cells.